fidoptMindboggle-101, 62 cortical regions
T1 MR of the brain of one healthy adult, skull-stripped, with the 62 cortical regions of the DKT31 protocol labelled by hand (Mindboggle-101).
Read before comparing (1)
- Cases. The fixed images of Mindboggle101's pairs: a test pair's image is a test case, a development pair's a development case. The moving images are left out.
| Accuracy | Cost | |||||||
|---|---|---|---|---|---|---|---|---|
| # | Method | Dice | Surface Dice | HD95 mm | Time s | RAM GB | GPU GB | Images |
| 1 | FastSurferVINNGPUapp | 0.827 ±0.012 | 0.904 ±0.008 | 3.40 ±0.29 | 24 | 3.7 | 3.9 | |
The order averages each method's ranks on Dice, Surface Dice, HD95 mm, so the first one is not always the best in every column. ± is the 95% interval of the mean over the 10 cases. Two neighbours are tied when a paired Wilcoxon test on the shared cases does not find the upper one better on Dice (5%): the places a method could hold are then shown under its own. The best value of each column is in colour. Click a row to see its images, a column title to sort by it. Time and memory measured on Workstation.
1 result not ranked: an older run, cases still missing, or a failure on every case
| Accuracy | Cost | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| # | Method | Dice | Surface Dice | HD95 mm | Time s | RAM GB | GPU GB | Machine | Images |
| FastSurferVINNGPUappolder run | 0.827 ±0.012 | 0.904 ±0.008 | 3.40 ±0.28 | 31 | 2.6 | 3.7 | Laptop | ||
Dice: how much the organ contours overlap, 1 is perfect. Surface Dice: the share of the contours' surfaces within a tolerance of each other, 1 is perfect. HD95: distance between the contours' surfaces.
Case by case
Click a score to look at that result: the image, the truth in green and the method's map in red. Underlined scores have their image; for the others you see the case without the result.
About the data
- Truth
- contours by experts the dataset's manual cortical labels, 62 regions (DKT31 protocol)
- Licence
- CC BY 4.0, over upstream scans under non-commercial terms (NKI-RS) and the BIRN licence (Kirby21)
10 cases for tuning, never tested
HLN-12-3_NKI-RS-22-17/fixed, NKI-RS-22-12_NKI-TRT-20-1/fixed, NKI-TRT-20-20_MMRR-21-11/fixed, NKI-TRT-20-10_NKI-TRT-20-7/fixed, MMRR-21-14_HLN-12-1/fixed, NKI-RS-22-15_HLN-12-11/fixed, NKI-TRT-20-19_NKI-RS-22-7/fixed, NKI-RS-22-21_MMRR-21-16/fixed, NKI-RS-22-18_NKI-TRT-20-17/fixed, NKI-RS-22-6_NKI-RS-22-5/fixed