fidoptwarpfield
The warpfield library with its default recipe's two deformable levels: FFT block matching of 2D projections on the GPU, from the aligned pair (the recipe's translation and affine levels left out, as for every method). The moving image is brought onto the fixed grid; each image is shifted to start at zero, the recipe's background clipping being made for microscopy.
RegistrationGPUversion 0.2.2every datasetMIT
Run it
With its KonfAI app, at the benchmark's settings (the fidopt app repositories are private for now: a Hugging Face token with access opens them):
pip install konfai-apps konfai-apps infer fideus-labs/fidopt-registration:Warpfield -i fixed.nii.gz -i moving.nii.gz -o out --gpu 0
The app on Hugging Face: its model, its settings and how it is scored.
Results
No result yet.
- Reference
- Hoffmann and Judkewitz, warpfield (software, 2025)