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SynthMorph

SynthMorph, networks trained only on synthetic images drawn from brain label maps, so that one model registers brain MR of any contrast and resolution without preprocessing: joint affine and deformable registration, run as its authors' mri_synthmorph register runs it.

RegistrationCPUversion mri_synthmorph 21b31bf, synthmorph.affine.2.h5 (sha256 1ac5304b) and synthmorph.deform.3.h5 (sha256 95b367cd)brain · MRFreeSurfer Software License Agreement (code); MIT (weights)

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Source
github.com/freesurfer/freesurfer/tree/21b31bf1b58ac195567c7777b21228130e4326e1/mri_synthmorph
Reference
Hoffmann et al., Imaging Neuroscience 2024; Hoffmann et al., IEEE TMI 2022